Chris Rands's repositories
biopython-coronavirus
Biopython Jupyter Notebook tutorial to characterize a small genome
biopython_workshop
A basic introduction to Biopython, intended for a classroom based workshop
biopython-notebook
Notebooks to introduce biopython
MMprofiler
Create mmseq2 profiles from (unaligned) protein families/clusters, under development
annotated_profile_HMMs
Sets of protein familes represented as profile HMMs annotated for antibiotic resistance and virulence function.
biopython.github.io
Source of biopython.org website, migrated from MediaWiki
public_scrnaseq
[WORK IN PROGRESS] scRNA-seq basic data processing of the genes vs. cells matrix (mirror from gitlab)
too-many-cells
Cluster single cells and analyze cell clade relationships with colorful visualizations.