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Christopher Chang (chrchang)

chrchang

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Company:@grailbio

Location:Fremont, CA

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Christopher Chang's starred repositories

manylinux

Python wheels that work on any linux (almost)

Language:ShellLicense:MITStargazers:1409Issues:0Issues:0

holy-build-box

System for building cross-distribution Linux binaries

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glibc_version_header

Build portable Linux binaries without using an ancient distro

Language:C++License:MITStargazers:794Issues:0Issues:0

highway

Performance-portable, length-agnostic SIMD with runtime dispatch

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regenie

regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.

Language:C++License:NOASSERTIONStargazers:177Issues:0Issues:0

fast_double_parser

Fast function to parse strings into double (binary64) floating-point values, enforces the RFC 7159 (JSON standard) grammar: 4x faster than strtod

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gorgonia

Gorgonia is a library that helps facilitate machine learning in Go.

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stb

stb single-file public domain libraries for C/C++

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fmt

A modern formatting library

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uarch-bench

A benchmark for low-level CPU micro-architectural features

Language:C++License:MITStargazers:671Issues:0Issues:0

PRSice

A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores

Language:CLicense:GPL-3.0Stargazers:176Issues:0Issues:0

bio

Bioinformatic infrastructure libraries

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fastvalidate-utf-8

header-only library to validate utf-8 strings at high speeds (using SIMD instructions)

Language:CLicense:Apache-2.0Stargazers:292Issues:0Issues:0

emeraLD

tools to efficiently retrieve and calculate LD

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nibble-sort

Many functions in C for sorting the nibbles in an 8-byte word

Language:CLicense:NOASSERTIONStargazers:32Issues:0Issues:0

libdeflate

Heavily optimized library for DEFLATE/zlib/gzip compression and decompression

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libpopcnt

🚀 Fast C/C++ bit population count library

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arraylayout

Experiments with array layouts for comparison-based searching

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highwayhash

Fast strong hash functions: SipHash/HighwayHash

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xxHash

Extremely fast non-cryptographic hash algorithm

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zstd

Zstandard - Fast real-time compression algorithm

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blis

BLAS-like Library Instantiation Software Framework

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flashpca

Fast Principal Component Analysis of Large-Scale Genome-Wide Data

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pigz

A parallel implementation of gzip for modern multi-processor, multi-core machines.

Language:CStargazers:2606Issues:0Issues:0

bcbb

Incubator for useful bioinformatics code, primarily in Python and R

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