chrchang / plink-ng

A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is now focused on building out support for multiallelic, phased, and dosage data in PLINK 2.0.

Home Page:https://www.cog-genomics.org/plink/2.0/

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How to get 0x55 in pgen_spec?

biona001 opened this issue · comments

Hello,

In the example at end of section 2.3.5, I wonder how can I get 0x55?

Also, can you clarify by "every other even sample..." do you mean 0001 0001 0001.... or 0100 0100 0100 0100....?

  • In the first case I get 0x88
  • The second case I get 0x44

By "every other even sample", I meant all even sample IDs except for ID 10000. I'll reword this to eliminate the ambiguity.

Oh, I see. Thank you very much.