Shing Wan Choi's repositories
PRS-Tutorial
A tutorial on how to run basic polygenic risk score analysis
RNA-Seq-Analysis
The analytic pipeline used for RNA Sequencing
GreedyRelated
Script for greedily remove related samples
choishingwan.github.io
Personal Website
PRSice-paper-script
Script used for performing simulation presented in the PRSice-2 paper
bigparallelr
Parallel tools in R
curatedDataBase
This is for putting all the curated data base information
plink-ng
A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is now focused on building out support for multiallelic, phased, and dosage data in PLINK 2.0.
uk-biobank-piplines
Pipelines for processing the UK biobank data