Jiapeng Chen's repositories
cancerWGS_pipeline
A Snakemake pipeline for calling SSMs and CNVs from matched normal-tumor WGS data
GOTTCHA
Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:
IMPACT-Pipeline
Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay
machine-learning-Andrew-Ng
Machine learning online course from Andrew Ng.
Machine-Learning-Specialization-Coursera
Contains Solutions and Notes for the Machine Learning Specialization By Stanford University and Deeplearning.ai - Coursera (2022) by Prof. Andrew NG
Metatranscriptomics_Pilot
A Pilot Project for Read Counts, Novel Transcripts and Population Level Functions in Metatranscriptomes
MoCaSeq
Analysis pipelines for cancer genome sequencing in mice.
rock-paper-scissors-py
a basic game written in Python
Rosalind-1
Solutions to Rosalind Bioinformatics Problems
VirusNGS
Discover virus with Next-generation sequencing data
workshop-reproducible-research
NBIS/ELIXIR course: Tools for Reproducible Research