chenweng1991

Chen Weng's repositories

R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.

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Analysis reproducibility of Weng et al paper "Deciphering cell states and genealogies of human hematopoiesis"

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To analyze whole genome Crispr screening data

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CUT&RUN and CUT&Tag data processing and analysis

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R package to detect breakpoints and assign somies to scATAC-seq data

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Ultrafast TCR clustering algorithm based on geometric isometry

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Highly specific clustering of T cell receptor CDR3s

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My Renv Base

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SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.

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Functions for identifying and characterizing continuous developmental trajectories in single-cell data.

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Single Nucleus Analysis Pipeline for ATAC-seq

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