chentao807 / cysparse

Python/Cython library to replace PySparse

CySparse

A fast sparse matrix library for Python/Cython.

Only Python 2.7 is supported for now. We plan to support Python 3.3 later.

Dependencies

Python version

For the Python version:

• NumPy;

If you intend to generate the documention:

• Sphinx;
• sphinx_bootstrap_theme;

To run the tests:

• nose or unittest;

To run the performance tests:

[TODO]

Cython version

For the Cython version, include everything needed for Python and add:

• Cython;
• cygenja;

Installation

Python version

1. Clone repository (git clone https://github.com/PythonOptimizers/cysparse.git) or copy source code.
2. Install Python dependencies.
3. Copy cysparse_template.cfg to cysparse.cfg and adapt it to your needs.
4. Invoke python setup.py install.

Cython version

[TODO]

Run tests

Invoke:

python run_tests.py

Try the -h switch to see what options are available. Note that you need to install the library to run the tests.

Run performance tests

[TODO]

Want to follow the implementation of CySparse?

See the Wiki for details!

Release history

• Version 0.7.3 released on Apr 18, 2016

  Minor bugs fixes. Added tests for the find() method. Now at 14195 tests.

• Version 0.7.2 released on Apr 15, 2016

  Conversion from CSC and CSR to LL with to_ll() added. Now at 14027 tests.

• Version 0.7.1b released on Feb 17, 2016

  Added some tests for the operator proxies. Only for linear combinations of matrix-like objects. Now at 13859 tests.

• Version 0.7.1 released on Feb 16, 2016

  Linear combinations of Matrices/matrix-like objects are now possible.

• Version 0.7.0 released on Jan 20, 2016

  Introduction of Travis. create_conjugate_transpose() -> create_adjoint()

• Version 0.6.0 released on Jan 19, 2016

  Changed matvec_htransp -> matvec_adj and matdot_htransp -> matdot_adj.

• Version 0.5.0 released on Jan 09, 2016

  Introduction of Operator Proxies (SumOp, MulOp).

• Version 0.4.0 released on Dec 30, 2015

  All PyXXX_Check() functions now in s_mat.

• Version 0.3.0 released on Dec 27, 2015

  This is a major update. New documentation, split between users and developers. Pdf is now enabled. Completely new API. Thousands (10499) of unit tests added.

• Version 0.2.2 released on Dec 14, 2015

  Clean up.

• Version 0.2.0 released on Dec 14, 2015

  Use of cygenja, decoupling of linalg.

• Version 0.1.5 released on July 18, 2015

  Added UMFPACK.

• Version 0.1.4 released on July 9, 2015

  Skipped immediately to version 0.1.4 (versions 0.1.2 and 0.1.3 were incorporated in version 0.1.0).

  Better support for LLSparseMatrixViews.

• Version 0.1.0 released on July 6, 2015

  First release with multiple types.

• Version 0.0.1 released on April 23, 2015