chenh19 / overlap_SNP

An automated overlapped SNP extraction tool

OverlapSNP

An automated extracting tool for Illumina SNP arrary/AmpliSeq panel-overlapped SNPs.
Current version: v0.1.0

Resources

• Illumina SNP array file
• AmpliSeq target panel file (an example here)

Package installing

# after installing R
sudo -i R
install.packages(c("foreach", "doParallel", "dplyr", "tidyr", "filesstrings", "GenomicRanges"))
BiocManager::install("GenomicRanges")
q()