chekahchek / kaggle-nbme

Source code for Kaggle competition (NBME - Score Clinical Patient Notes) - Top 9%

NBME - Score Clinical Patient Notes

Introduction

This repository contains the inference code used in the NBME - Score Clinical Patient Notes kaggle competition. This solution is ranked 120th out of 1471 teams (top 9%). More explanation on the code can be found here.

Setting up

Before running the code, you would need to download the dataset as well as the models used in the competition.

$ export KAGGLE_USERNAME=[your kaggle username]
$ export KAGGLE_KEY=[your kaggle api key]
$ chmod +x ./setup.sh
$ ./setup.sh

Run inference

$ python src/main.py