changwn

scFEA

single cell Flux Estimation Analysis (scFEA) Try the below web server!

Deconvolution_paper

reorganize paper of deconvolution method

ICTD

A semi-supervised cell type identification and deonvolution method for multi-omics data

SRMR

Spatially and Robustly Hybrid Mixture Regression Model for Interence of Spatial Dependence

RobMixReg

Robust Mixture Regression https://cran.r-project.org/web/packages/RobMixReg/index.html

BC-CRC

Bi-clustering based identification of colon cancer prognosis marker gene modules in complementary to CMS classification

car_t_stimulation

Data and code for analyzing and predicting different CAR-T cell products

CARPOOL

cellrank

Probabilistic Fate Mapping using RNA Velocity

ChIP-seq_JiZhang

combinatorial_signaling_motif_libraries

DTF-Drug-Synergy

Codes and data for DTF

ECE629

enrichR

An R interface to enrichR

Kassandra

Bostongene cell deconvolution algorithm from RNAseq

MALS

mars

Discovering novel cell types across heterogenous single-cell experiments

pathview

pathway based data integration and visualization

PCASA

PCASA is a tool for predicting the best gene combination targets of surface antigens by classification of malignant and non-malignant cells using single-cell RNA-seq data.

RCATE

RobSpatialReg

Robust Spatial Mixture Regression

S4

The code for S4 project

scatterpie

:art: scatter pie plot

SCDC

SCDC

scGNN

scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks

scTenifoldKnk

R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.

SnapATAC

Analysis Pipeline for Single Cell ATAC-seq

spatialcluster

spatially-constrained clustering in R

TernaryBody

topology