Chadi Saad's repositories
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covid19_sequencing
As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.
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fusion-report
Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.github.io/fusion-report/example/
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MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
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rnafusion
RNA-seq analysis pipeline for detection gene-fusions
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sentieon-scripts
Helper scripts for biological data processing from Sentieon
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WES.WGS
Covid-19 HGI WES/WGS burden test BQC-19 pipeline
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