Chris Friedline's repositories
theme-dracula
Cookiecutter-based Dracula Theme for JupyterLab
Apollo
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Awesome-CV
:page_facing_up: Awesome CV is LaTeX template for your outstanding job application
aws-genomics-workflows
Genomics Workflows on AWS
batchspawner
Custom Spawner for Jupyterhub to start servers in batch scheduled systems
colabcode
Run VSCode (codeserver) on Google Colab or Kaggle Notebooks
cromwell-tools
A collection of Python clients and accessory scripts for interacting with the Cromwell
docker-asciidoctor
:ship: A Docker image for using the Asciidoctor toolchain to process AsciiDoc content
homebrew-science
:beer::microscope: Scientific formulae for the Homebrew package manager
jupyterlab
:scream: A dark theme for JupyterLab
jupyterlab_dracula
Dracula Theme for JupyterLab
lofreq
LoFreq Star: Sensitive variant calling from sequencing data
mnnpy
An implementation of MNN (Mutual Nearest Neighbors) correct in python.
moto
A library that allows you to easily mock out tests based on AWS infrastructure.
prezto
The configuration framework for Zsh
pyranges
Performant Pythonic GenomicRanges
VISOR
VarIant SimulatOR for short, long and linked reads