cellimnet's repositories
scellseg-publish
A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.
microsnoop-publish
Microsnoop: A generalist tool for microscopy image representation
FociNet
We have built a FociNet pipeline to analyze fluorescent images with intranuclear foci formation to evaluate DNA damage. It can produce accurate nuclei segmentation and subsequent classification of single nuclei. We have tested it on computers with common GPU, and it performs well. The classification part is based on tensorflow 1.12.0.
AI-Expert-Roadmap
Roadmap to becoming an Artificial Intelligence Expert in 2020
plaquebox-paper
Repo for Tang et al, bioRxiv 454793 (2018)