ceesem

refid2bib

biorxiv, doi, and arxiv ids -> bibtex entry

apical_classifier

Tools for training and applying an apical classifier on skeleton data from the chunkedgraph

MeshworkTutorial

An introduction notebook for Meshwork objects

pcg_skel

scryingstone

Code for building neuroglancer links from edit logs

AnnotationGuide

bitsandbobs

ceesem.github.io

choosy

A lightweight package for value-based sampling of rows/counts from a dataframe

cortical-layers

Automatically detecting cortical layers of MICrONS segmentation data

dash-app-template

dash-cell-type-viewer

dfbridge

DistanceDependentConnectivity

Measure distance-dependent connection probability in EM dataset

guidebook

mesh_skeleton_interaction_demo

meshwork

Some working tools for neuronal meshes

neuroglancer

WebGL-based viewer for volumetric data

page

personal website

proofreading_state

PyChunkedGraph

Chunked graph structure used for human proof-reading in Python

scene_label

simple vtk scene label

sdf-pyembree-test

skeletor

Mesh Skeleton Extraction Using Laplacian Contraction

swdb_2021

swdb_2023

Summer Workshop on the Dynamic Brain 2023

table-bridge

Dataframe comparison and google sheet interaction

text_image_thumbnails

Generate configurable image thumbnails from title/author/abstract data

topological_anatomy_tutorials

visitorCenterPrototype

prototype dynamic info for CAVE