cdunn2001

git-sym

Handling large files in git via symlinks

nim-gason

Nim port of gason (for now)

jsoncpp

A C++ library for interacting with JSON.

compile-times

From reddit, a simple way to compare compile-times for Rust, Go, C++, Nim,D, Pascal, ...

Jellyfish

A fast multi-threaded k-mer counter

nibSV

Nim

Nim (formerly known as "Nimrod") is a compiled, garbage-collected systems programming language which has an excellent productivity/performance ratio. Nim's design focuses on efficiency, expressiveness, elegance (in the order of priority).

blasr

BLASR: The PacBio® long read aligner

blasr_libcpp

FALCON

FALCON: experimental PacBio diploid assembler

fork

Subset of pitchfork

gason

Lightweight and fast JSON parser for C++

go-consensus

fc_consensus from FALCON

homebrew-core

🍻 Default formulae for the missing package manager for macOS

krum-appdev-platform-starter

temp fork

luigi

Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.

meson

The Meson Build System

nim-consensus

Nim version of fc_consensus.py from FALCON

nim-consensus-bak

temp backup

nim-falcon

Nim FALCON

nim-parse

Performance tests for simple parsing with Nim

nim-project-template

Example for building a nim project with Continuous Integration

nimble

Package manager for the Nim programming language.

pbdagcon

A sequence consensus algorithm implementation based on using directed acyclic graphs to encode multiple sequence alignment

pbishtar

Experimental attempt at tarball

pypeFLOW

Flexible workflow engine

pypetest

For testing ideas in pypeFLOW

rs-try

Try some Rust stuff

toil

A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

v

Simple, fast, safe, compiled language for creating maintainable software. Supports translation from C/C++.