ccwang002

InvokeAI

InvokeAI is a leading creative engine for Stable Diffusion models, empowering professionals, artists, and enthusiasts to generate and create visual media using the latest AI-driven technologies. The solution offers an industry leading WebUI, supports terminal use through a CLI, and serves as the foundation for multiple commercial products.

tidytuesday

Official repo for the #tidytuesday project

pdfminer.six

Community maintained fork of pdfminer - we fathom PDF

harlequin

The SQL IDE for Your Terminal.

furo

A clean customizable documentation theme for Sphinx

Actions

⚙️ Supercharge your shortcuts

stat_rethinking_2023

Statistical Rethinking Course for Jan-Mar 2023

invisible-watermark

python library for invisible image watermark (blind image watermark)

Efficient_Python_tricks_and_tools_for_data_scientists

Efficient Python Tricks and Tools for Data Scientists

webr

The statistical language R compiled to WebAssembly via Emscripten, for use in web browsers and Node.

kaobook

A LaTeX class for books, reports or theses based on https://github.com/kenohori/thesis and https://github.com/Tufte-LaTeX/tufte-latex.

apsw

Another Python SQLite wrapper

hex-stickers

RStudio hex stickers

datacompy

Pandas, Polars, and Spark DataFrame comparison for humans and more!

whatshap

Read-based phasing of genomic variants, also called haplotype assembly

duckdb_engine

SQLAlchemy driver for DuckDB

inscriptis

A python based HTML to text conversion library, command line client and Web service.

sqlite_scanner

DuckDB extension to read and write to SQLite databases

make4ht

Build system for tex4ht

PureCN

Copy number calling and variant classification using targeted short read sequencing

BiocStickers

Stickers for some Bioconductor packages - feel free to contribute and/or modify.

HLA-LA

Fast HLA type inference from whole-genome data

genome-stratifications

Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium. These files can be used as standard resource of BED files for use with GA4GH benchmarking tools such as hap.py to stratify true positive, false positive, and false negative variant calls based on genomic context.

nextNEOpi

nextNEOpi: a comprehensive pipeline for computational neoantigen prediction

TMB

Tumor Mutational Burden

nullranges

Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRanges), or set of control ranges that are matched across one or more covariates (matchRanges).

swatcheR

Fast automatic selection of color swatches from images

umccrise

:snake: DRAGEN Tumor/Normal workflow post-processing

microphaser

pelican-drafts

Add a browsable drafts listing to your Pelican website