Constantine Chrysostomou's repositories

seqtables

Tools for analyzing NGS sequence data and aligned protein sequences

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igfft

FFT implementation for NGS antibody sequence alignments

redux-dropzone-component

Wrapping the dropzone.js element in a global store to allow for custom rendering of components and passing of dropzone component

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DBDA-python

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

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kentUtils

UCSC command line bioinformatic utilities

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mixed-base-codons

Implementation of genetic algorithm that determines the ratio of A/C/T/G at each codon position required to achieve a desired amino acid distribution

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multilevel_modeling

Tutorial on multilevel modeling, using Gelman radon example

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overlap-plots

Visualizing overlap and correlation between datasets

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python-machine-learning-book

The "Python Machine Learning" book code repository and info resource

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seqan_sandbox

Example programs that practice working with c++ seqan library for biological analysis

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smithwaterman

smith-waterman-gotoh alignment algorithm

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