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Caspar (caspargross)

caspargross

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Company:@imgag

Location:Tübingen

Home Page:http://caspar.one

Twitter:@Caspar_Gr

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imgag

Caspar's starred repositories

vega

A visualization grammar.

Language:JavaScriptLicense:BSD-3-ClauseStargazers:11005Issues:0Issues:0

hapdiff

SV calling for diploid assemblies

Language:PythonLicense:MITStargazers:23Issues:0Issues:0

hapdup

Pipeline to convert a haploid assembly into diploid

Language:PythonLicense:NOASSERTIONStargazers:86Issues:0Issues:0

jupyterlite

Wasm powered Jupyter running in the browser 💡

Language:TypeScriptLicense:BSD-3-ClauseStargazers:3762Issues:0Issues:0

gggenomes

A grammar of graphics for comparative genomics

Language:RLicense:NOASSERTIONStargazers:574Issues:0Issues:0

SmkTemplate

A template repository for snakemake workflows.

Language:PythonLicense:MITStargazers:32Issues:0Issues:0

StainedGlass

Make colorful identity heatmaps of genomic sequence

Language:HTMLLicense:MITStargazers:93Issues:0Issues:0

chezmoi

Manage your dotfiles across multiple diverse machines, securely.

Language:GoLicense:MITStargazers:12451Issues:0Issues:0

UxPlay

AirPlay Unix mirroring server

Language:CLicense:GPL-3.0Stargazers:1294Issues:0Issues:0

wfc

Wave Function Collapse library in C, plus a command-line tool

Language:CStargazers:347Issues:0Issues:0

redroid-doc

redroid (Remote-Android) is a multi-arch, GPU enabled, Android in Cloud solution. Track issues / docs here

Language:ShellStargazers:3941Issues:0Issues:0

pLannotate

Webserver and command line tool for annotating engineered plasmids

Language:PythonLicense:GPL-3.0Stargazers:99Issues:0Issues:0

sdrangel

SDR Rx/Tx software for Airspy, Airspy HF+, BladeRF, HackRF, LimeSDR, PlutoSDR, RTL-SDR, SDRplay and FunCube

Language:C++License:GPL-3.0Stargazers:2775Issues:0Issues:0

ISfinder-sequences

Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biotoul.fr/)

Stargazers:56Issues:0Issues:0

DRAGMAP

DRAGEN open-source mapper

Language:C++License:NOASSERTIONStargazers:152Issues:0Issues:0

arriba

Fast and accurate gene fusion detection from RNA-Seq data

Language:C++License:NOASSERTIONStargazers:218Issues:0Issues:0

snakemake-github-action

A Github action for running a Snakemake workflow

Language:ShellLicense:MITStargazers:51Issues:0Issues:0

ULTRA

ULTRA Locates Tandemly Repetitive Areas

Language:C++License:BSD-3-ClauseStargazers:22Issues:0Issues:0

NoiseCancellingRepeatFinder

Noise-Cancelling Repeat Finder

Language:PythonLicense:MITStargazers:22Issues:0Issues:0

Dot2dot

Dot2dot: Accurate Whole-Genome Tandem Repeats Discovery

Language:CStargazers:10Issues:0Issues:0

datameta-client

A high-level client for interacting with a DataMeta service.

Language:PythonLicense:Apache-2.0Stargazers:1Issues:0Issues:0

texme

Self-rendering Markdown + LaTeX documents

Language:JavaScriptLicense:MITStargazers:2276Issues:0Issues:0

unimap

A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment

Language:CLicense:MITStargazers:85Issues:0Issues:0

telegram-kaios

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bamsnap

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processx

Execute and Control Subprocesses from R

Language:RLicense:NOASSERTIONStargazers:229Issues:0Issues:0

miRFA

Functional analysis of miRNA including 1) miRNA target prediction, 2) correlation analyses between miRNA-target gene on mRNA (the cancer genome atlas) and protein levels (The cancer proteome atlas) 3) functional enrichment of significantly (positively and negatively) correlated miRNA targets.

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pbAA

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scRNA-seq

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nationalparkcolors

R package for color themes inspired by national parks

Language:RStargazers:218Issues:0Issues:0