CarmenSheppard

Carmen Sheppard's starred repositories

Pneumococcal serotype quantification using NGS reads

Language:PythonGPL-3.0300

Pneumococcal Capsular Typing tool for NGS data

Language:PythonGPL-3.01400

in silico typing of the H. influenzae cap locus

Language:PythonGPL-3.01000

Language:PythonApache-2.0100

snipit: summarise snps relative to your reference sequence

Language:PythonGPL-3.013500

Fast genome and metagenome distance estimation using MinHash

Language:C++NOASSERTION38400

Pan-genome wide association studies

Language:PythonGPL-3.014700

Language:CMIT800

hybrid assembly pipeline for bacterial genomes

Language:C++GPL-3.054700

metadata for ongoing or published projects

Language:Perl100