cao-ben

cao-ben

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cao-ben's repositories

pykan

Kolmogorov Arnold Networks

License:MITStargazers:0Issues:0Issues:0

KMVO-algorithm

This program is the source code in our paper, KMVO Algorithm to Construct DNA Storage Codes

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chemprop

Message Passing Neural Networks for Molecule Property Prediction

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scButterfly

A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders

License:MITStargazers:0Issues:0Issues:0

scButterfly_source

Source codes for the reproduction of scButterfly

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BLEEP

Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning

License:Apache-2.0Stargazers:0Issues:0Issues:0

deepdistilling

Mechanistically interpretable neurosymbolic AI (Nature Comput Sci 2024): losslessly compressing NNs to computer code and discovering new algorithms which generalize out-of-distribution and outperform human-designed algorithms

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rfamgen

Code repository of "Deep generative design of RNA family sequences"

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histocartography

A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in computational pathology.

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License:GPL-3.0Stargazers:0Issues:0Issues:0

DNA-Storage-Transform

Single Read Reconstruction for DNA Data Storage Using Transformers (official implementation)

License:MITStargazers:0Issues:0Issues:0

DSI-QG

The official repository for "Bridging the Gap Between Indexing and Retrieval for Differentiable Search Index with Query Generation", Shengyao Zhuang, Houxing Ren, Linjun Shou, Jian Pei, Ming Gong, Guido Zuccon and Daxin Jiang.

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antibioticsai

Supporting code for the paper "Discovery of a structural class of antibiotics with explainable deep learning"

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seqrequester

A tool for summarizing, extracting, generating and modifying DNA sequences.

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genslm

GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics

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ncNet

ncNet, a Transformer-based model for supporting NL2VIS.

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RNA-GAN

Synthetic whole-slide imaging tile generation with gene expression profiles infused deep generative models - Cell Reports Methods

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GNNome-assembly

Learning to untangle genome assembly with graph neural networks.

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clash-for-linux

Linux 端使用 Clash 作为代理工具

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deepconsensus

DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.

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zfec

zfec -- an efficient, portable erasure coding tool

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PEKS

Implementation of Public Key Encryption with Keyword Search

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python-wheels

Prebuilt python wheels.

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License:GPL-3.0Stargazers:0Issues:0Issues:0

HE2RNA_code

Train a model to predict gene expression from histology slides.

License:GPL-3.0Stargazers:0Issues:0Issues:0

lt-codes-python

Fountain Code: Efficient Python Implementation of LT Codes

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