cancerit/NanoSeq Issues
Possible bug in filtering of indels
Updated 38gnomad filtering of indels
Closed 1results.cov.bed.gz last line
Updated 21Question about mutation results
Updated 1var -n parameter
Closed 3QC for indels
Closed 20Bug in 'post' step for indels
Closed 7Minimum base quality
Closed 4quay.io docker
Closed 1Recommended -c setting
Closed 2--mc option for runNanoSeq.py indel
Updated 2mouse genome masks
Closed 5indel VCF
Closed 1not all reads have the RB tags
Updated 7very low duplicate rate
Closed 11Version compatibility
Closed 1Genomic masks for hg38
Closed 7DSC_estimated_error_rates
Closed 2extract_tags.py error
Closed 6part Error
Closed 3Nextflow error
Closed 1bamaddreadbundles fails
Closed 5Mutation count per cell
Closed 2Output files question
Closed 4Within-plate cross-contamination
Closed 2CRAM files
Closed 2