Caitlin Simopoulos's repositories
lncRNA_conservation
Parsing though lncRNA predictions and identifying conserved molecular traits
crema
Classifying RNAs as lncRNAs by ensemble machine learning algorithms
eutrema_drought_transcriptomics
Code to accompany "Coding and long non-coding RNAs provide evidence of distinct transcriptional reprogramming for two ecotypes of the extremophile plant Eutrema salsugineum undergoing water deficit stress"
lncRNA-compGenomics
Using CREMA to identify lncRNAs in diverse plant species
metareport
automatic report generation from metalab result
MSstatsConvert
Converter functions for the MSstats package
MSstatsTMT
R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
pca_ggplots
PCA biplots with ggplot2
precise-db
A high-fidelity E. coli RNA-seq compendium
R_sessions
Informal R sessions for Golding/Weretilnyk labs!
reproducible-figs
Showing you the benefits of reproducible figures :)