byzheng / genomicSimulation

An R package that runs stochastic simulations of genetics of plant breeding schemes

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genomicSimulation

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This project is an R package that runs stochastic simulations of genetics in breeding schemes. The core of the package is written in C. An overview of the tool is available at this link..

This package is not yet submitted to CRAN. See the latest release here.

Documentation and Guides

The package vignette is available in the repository at this link. The vignette provides usage guides and an overview of the functions and simulation methodology of the package.

The docs folder contains the documentation files. These can also be viewed in R using the command ?[function name].

Additional help files

A guide to installing package (specifically for the UQ HPC system) is available here.

C version

The C functions that form the base of this package are also provided on GitHub under the name genomicSimulationC. This version allows you to run the simulation using C function calls.

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An R package that runs stochastic simulations of genetics of plant breeding schemes

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Language:C 82.2%Language:R 17.8%