Büşra Savaş (busrasavas)

busrasavas

Geek Repo

Company:Izmir Biomedicine and Genome Center

Location:İzmir, Turkey

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Büşra Savaş's repositories

gmx_corr

gmx_corr converts the covariance matrix which is produced by GROMACS covar to cross correlation matrix and creates a heat map figure.

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pymol-color-alphafold

PyMOL extension to color AlphaFold structures by confidence (pLDDT).

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AFanalysis

Quick analysis for AlphaFold models

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gmx_performance_on_HPC

Gromacs performance benchmarking on different HPC platforms

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alphafoldv2.2.0

Open source code for AlphaFold.

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bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

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CSB-WS

This page is prepared to model the complex of phage G3P and E. Coli TolA

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eif2g-eif2bg-ints

The modeling of eif2g-eif2bg interactions

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interfacea

An open-source library for the analysis of protein interactions.

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KDM6A-interacting-models

Contains the structural models of KDM6A, TLE1, HES1, RUNX1-2, HHEX interactions

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