Very important to check tomograms.vll Check if filament Repick does reset the origin
Filament analysis using Dynamo
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aa_setup.m (CPU)
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aa_correctFlaDirect.m (CPU) * Important for axoneme not other
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aa_imodModel2Filament.m (CPU)
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aa_cropAndAverage.m (CPU)
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aa_intraAln.m (GPU)
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aa_alignIntraAvg.m (CPU)
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aa_alignAllParticles.m (GPU)
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aa_generateAxonemeAverage.m (CPU) * Optional for axoneme
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aa_filamentRepick.m (CPU)
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aa_intraAvgRepick.m (GPU)
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aa_alignRepickAvg.m (CPU)
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aa_alignRepickParticles (GPU)
For doublet MTD, make sense to first align with 8-nm repeat, then repick with 16-nm repeat