bsipos

thist

A go package for generating online histograms and plotting them in the terminal and PDFs

phylosim

An R package for the Monte Carlo simulation of sequence evolution

uncle_psl

A BLAT (PSL) to SAM converter.

bsipos-conda

Automating conda package uploads for https://anaconda.org/bsipos

bioconda-recipes

Conda recipes for the bioconda channel.

csvtk

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

rampart

Read Assignment, Mapping, and Phylogenetic Analysis in Real Time

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang

biogo

biogo is a bioinformatics library for Go

bsipos.github.io

Botond's home repo

hts

biogo high throughput sequencing repository

logomaker

Software for the visualization of sequence-function relationships

manuscript-pasp

PAT-seq manuscript

paper-ng-sam

Pipeline for simulating NG-SAM experiments

paper-pasp

paper-rlsim

Analysis pipeline for assesing biasing factors in Illumina RNA-seq protocols through realistic simulations

pcrcoal

pcrcoal is an R package implementing the coalescent approach to PCR simulation developed by Weiss and von Haeseler (NAR, 1997)

rlsim

A package for simulating RNA-seq library preparation with parameter estimation

rush

A cross-platform command-line tool for executing jobs in parallel

rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

simcopy

An R package simulating the evolution of copy number profiles along a tree

spoa

SIMD partial order alignment tool/library

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

yaegi

Yaegi is Another Elegant Go Interpreter