bschilder / ThreeWayTest

Summary statistics-based association test for identifying the pleiotropic effects with set of genetic variants

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Create Docker container

bschilder opened this issue · comments

Built and launch a Docker container with all ThreeWayTet deps installed.
Can be done easily with rworkflows by changing the arguments a bit:

rworkflows::use_workflow(run_docker = TRUE, docker_user = "bschilder", docker_org = "neurogenomicslab", force_new = TRUE)

Hosting on the neurogenomicslab account for now, but do let me know if you have your own account you prefer to host on @ftdbdl . Either way is fine with me.
https://hub.docker.com/?namespace=neurogenomicslab

Now launched here:
https://hub.docker.com/repository/docker/neurogenomicslab/threewaytest/general

I've also added a vignette to show how to use the container by running:

rworkflows::use_vignette_docker(docker_org = "neurogenomicslab")

Just ran the Docker vignette to confirm everything is working. And indeed, the ThreeWayTest container works great!

Screenshot 2023-03-08 at 12 44 06