brunospinelli / pyrat

PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming can perform animal behavior analysis more simpler.

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PyRat - Python in Rodent Analysis and Tracking


PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming can perform animal behavior analysis more simpler.

Installation


The latest stable release is available on PyPi, and you can install it by saying

pip install pyratlib

Anaconda users can install using conda-forge:

conda install -c conda-forge pyratlib

To build PyRat from source, say python setup.py build. Then, to install PyRat, say python setup.py install. If all went well, you should be able to execute the demo scripts under examples/ (OS X users should follow the installation guide given below).

Alternatively, you can download or clone the repository and use pip to handle dependencies:

unzip pyratlib.zip
pip install -e pyratlib

or

git clone https://github.com/pyratlib/pyrat.git
pip install -e pyratlib

By calling pip list you should see pyrat now as an installed package:

pyrat (0.x.x, /path/to/pyratlib)

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About

PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming can perform animal behavior analysis more simpler.

License:MIT License


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Language:Python 100.0%