briney

abtools

Analysis of antibody NGS data

nwalign3

updated version of nwalign with Python 3.X compatibility

abcloud

Launch and manage cloud computing resources for antibody repertoire analysis

clonify

clonify-python

abx_tutorial_2019

cvisb_workshop_2020

AIRR-training

antiberta

Public repository describing training and testing of AntiBERTa.

baltic

baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).

basespace-python-sdk

BaseSpace Python SDK

brineylab-workspace

🛠 All-in-one web-based IDE specialized for machine learning and data science.

clonify-scirep2016data

Sequence data for the Clonify publication (Briney et al., 2016)

cocalc-docker

Docker setup for running CoCalc as downloadable software on your own computer

conda

Specifying a conda environment with `environment.yml`

DeepAb

Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.

dit

Python package for information theory.

dkube-helm

Repository to host dkube helm charts

FoldFlow

FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation

imnet

imNet: a Sequence Network Construction Toolkit

locuspocus

mabtools

ml-road

Machine Learning Resources, Practice and Research

nextgen_agbc_paper

opentrons_protocols

research-group-web

a template for research group sites

tutorials

vaxtools

VRam142.github.io

:sparkles: Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll

VRC01gH-GT3