何鹏 (brianpenghe)

brianpenghe

Geek Repo

Company:European Bioinformatics Institute

Location:San Francisco

Home Page:brianpenghe.github.io/home/

Twitter:@PengHeCam

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何鹏's repositories

Bio-Jobs

A list of positions (mostly biology-related) open to apply

python-genomics

A set of files to do genomics analysis on python

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Matlab-genomics

This is a set of codes to perform genomics analysis on Matlab

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gtfgff-scripts

a set of programs initiated by Georgi Marinov for .gtf file/.gff annotation file processing

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Seurat3-plus

A set of R codes to make Seurat3 running easier

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ArchR-plus

Expanded functions for the ArchR package for scATAC-seq analysis

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bamsam-scripts

a set of programs initiated by Georgi Marinov for .sam file/.bam file processing

linuxshell-genomics

A set of basic scripts to handle genomics tasks using linux shell

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MusicAutoTranscription

A GUI for visualizing pitches from a wav file --- Written by Albert Chern

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sRNAplot

A tool to visualize various sRNA characteristics

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basecloud

Base R/python/etc. internal OpenStack cloud setup for Teichlab

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donut

donut plot function for MATLAB

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e-coli-Ribosome-profiling

a set of scripts for prokaryotic ribosome profiling

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GetDependency

A script to visualize script dependencies

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LatexTutorialCSSACambridge

This repo hosts the project files for a Latex Workshop presented by Daoming Dong and Youchao Wang for CSSA Cambridge, UK, April 20th, 2019

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limbcellatlas

This repository contains codes used for the human fetal limb cell atlas.

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lung-immune-cell-atlas

This is a folder containing information of the human fetal lung leukocyte atlas

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Monocle3-alpha-plus

a set of R scripts to run Monocle3-alpha in a better way

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Monocle3-beta-Plus

A set of functions to be used with Monocle3-beta (monocle3_0.1.2)

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plate_scATAC-seq

A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method

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pneumonia

**新型冠状病毒肺炎地级市疫情图

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PVZOnlineTool

植物大战僵尸Online脑力达人速查工具

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pySankey

You can find the beta version of PySankey on the dev branch

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SnapATAC

Single Nucleus Analysis Pipeline for ATAC-seq

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