brettvanderwerff

Flaskerizer

Automatically create Flask apps from Bootstrap templates

Reddit-Guestbook

A SQL and Docker powered guest book

flask_blackjack

A websocket based real-time card game built using Flask and Socket.IO

Mushroom-Map-Maker

Flask app that generates a heat map of a specific mushroom's distribution across the globe

parallel-python

Python code samples from the High Performance Computing with R and Python workshop, Presented by Brett Vanderwerff on 11/13/18

Sentiment-Analyzer

Sentiment analysis Flask app with vaderSentiment and word_cloud

speed_date

A simple wrapper for Pandas to_datetime method that speeds up datetime conversions

TCGA_survival_analysis

Workflow for survival analysis of cancer patients from the Cancer Genome Atlas project

TCGA_upper_quantile_normalization

A tutorial for reproducing the upper quantile normalization of TCGA raw counts data

Harding-RNA-Sequencing-Pipeline

A pipeline for analyzing RNA sequencing data for the Harding lab at WSU

var_annot

A simple VCF annotation tool. (for coding challenge)

auto_sql

auto_sql is a memory aware csv to sqlite converter

bitool

A Python3 bittorrent client for Linux (WIP)

cbioportal

cBioPortal for Cancer Genomics

cbioportal-docker

A context to create cBioPortal docker images

cbioportal-frontend

React Frontend of cBioPortal :tada:

city-scrapers

Data collection system for City Bureau Documenters Project

dark-proteome-visualization

IsoformSwitchAnalyzeR

An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)

Journal-Rank

Flask app for reviewing academic journals

Magnet2Torrent

This will convert a magnet link into a .torrent file

oncotree

package_tutorial

(WIP) A tutorial for packaging projects for the Python Package Index (PyPI)

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

peer_finder

Tool for getting a list of peers for bittorrent

play-books-notes

:books: API & Frontend for getting your annotations and quotes from the Google Play Books App. :book:

Portfolio-Website

The code for my personal website

python-ecology-lesson

:page_with_curl: Data Carpentry Python lessons on ecology.

TimeManager

Flask application for managing time during biological experiments

Zika-RNAseq-Pipeline

An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study