Issue with vcf.nim when running nimble test or importing
NatPRoach opened this issue · comments
Hello,
I'm running into a problem using hts-nim. Upon downloading the git repo and using nimble install it seems to install fine, but upon running nimble test, or attempting to import hts in any of my nim scripts, I'm getting the following error:
/Users/nproach/Documents/src/hts-nim/src/hts/vcf.nim(202, 35) Error: undeclared identifier: 'csize_t'
stack trace: (most recent call last)
/private/var/folders/84/b9w2y49j5v55sc9sq9tn4qkm0000gn/T/nimblecache/nimscriptapi.nim(165, 16)
/Users/nproach/Documents/src/hts-nim/hts_1286.nims(25, 8) testTask
/usr/local/Cellar/nim/1.0.0/nim/lib/system/nimscript.nim(252, 7) exec
/usr/local/Cellar/nim/1.0.0/nim/lib/system/nimscript.nim(252, 7) Error: unhandled exception: FAILED: nim c -d:useSysAssert -d:useGcAssert --lineDir:on --debuginfo -r tests/all [OSError]
Error: Exception raised during nimble script execution
I'd appreciate any help you can provide on fixing this issue. Thanks!
hi, I just pushed a change for this. Recent versions of nim are expecting csize_t, but this should be fixed for nim 1.0.0 if you git pull.
That seems to have fixed it! Thanks!
great! thanks for reporting.