brendan-rius / bioinformatics

Quick ugly bioinformatics scripts in Python I wrote while learning about bioinformatics

Bioinformatics toolbox

This repository contains Python script I wrote while leraning about bioinformatics. These scripts are ofter ugly and not optimized, because just written as POC or for quick testing.

Conventions

• The sequences are uppercase (ACGT, not acgt).
• When talking about nucleotides, the order will always be A, C, G , T (alphabetical order). For example, when there is an array of size 4 (one for each nucleotide), the first element corresponds to A, the second to C, the third to G and the last one to T