brantfaircloth

msatcommander

locate microsatellite repeats, design locus-specific primers, and tag 'em

p3wrapr

A python wrapper for primer3 - including primer checking and tagging

CloudForest

Biological Tools Converted to Run on AWS

gmconvert

convert ABI Genemapper export files to a useful format

mpimap

mpi4py_map provides a simple map() interface to mpi4py that allows easy parallelization of function evaluations over sequential input.

pufferfish

anolis

THIS PROJECT HAS MOVED

bayes-phylo-tools

tools for formatting and running mrbayes and beast files

bbox

consprimers

universal primers amplifying inter-UCE sequence

django-cms

An Advanced Django CMS.

encounters

Determine encounter rates between radio-collared individuals using PostGIS + Python

homebrew

The missing package manager for OS X

mpest

faircloth's modified version of mpest

msat

classes and code for locating microsatellite motifs in DNA sequences

roots

sliding_primer

Designs primers for overlapping segments along extended sequences

tagging

sequence tagging and tracking for next-generation sequencers

test

test

utilities

common code that i tend to use a lot

alaska

A test repository

assignment-1

BIOL7800 Assignment 1

CompPhylo_Spr17

Material for the Spring 2017 Computational Phylogenetics class

conda-build

Commands and tools for building conda packages

cookiecutter-pypackage

Cookiecutter template for a Python package. See https://github.com/audreyr/cookiecutter.

docker-transcode

a centos 7 docker container for transcoding audio files

freebayes

Bayesian haplotype-based polymorphism discovery and genotyping.

PretextView

OpenGL Powered Pretext Contact Map Viewer

pylonsrtd

Pylons Project documentation on RTD

test-assignment-1