brainglobe / cellfinder

Automated 3D cell detection in very large images

Home Page:https://brainglobe.info/documentation/cellfinder/index.html

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

Add tests for structure splitting code

dstansby opened this issue · comments

The structure splitting code at https://github.com/brainglobe/cellfinder-core/blob/8d9c0767f81ce66c547a0c0a654c7466cc7e569f/src/cellfinder_core/detect/filters/volume/structure_splitting.py is currently not tested in the test suite. The conditions under which it's called should be determined, and from that some tests added that exercise the code written. It is probably worth tackling #286 first to understand how the code works.

Yup definitely needed - brainglobe/cellfinder-core#158 has snuck through.