Update cell classification network
adamltyson opened this issue · comments
Adam Tyson commented
For many reasons the existing cell classification network (and associated helper functions) is suboptimal:
The use of TensorFlow is also causing headaches:
• #293
I think now is the time to fix this. Previously I've raised brainglobe/cellfinder-core#220 and brainglobe/cellfinder-core#221. But essentially my idea is to update the code (refactoring as we go) to Keras 3.0 which is now out.
It would also be cool to address this in a way that would support:
sfmig commented
First steps (chat with @IgorTatarnikov)
- migrate to Keras 3.0
- verify accuracy of results (via tests)
- verify no performance differences (via time/memory benchmarks)