brain dynamics lab @ stanford

dyneusr

Dynamical Neuroimaging Spatiotemporal Representations (DyNeuSR)

tmapper

For temporal mapper code

dyneusr-notebooks

DyNeuSR notebooks and tutorials

neumapper

A scalable Mapper algorithm for neuroimaging data analysis

w3c

dyneusr-fire

A command line interface for DyNeuSR

indcon

Code for extracting individual contribution from group Structural Covariance Matrices (SCM). See this article for more info - https://dx.doi.org/10.1016%2Fj.neuroimage.2015.07.006

fmri-hyperscan-3

The collaborative 3-person Pictionary task is a multi-player version of the Pictionary game [1]. The goal of the task is to draw a verb independently and collectively for others to guess. Nine verbs were drawn over three runs. The drawing of each verb can be split into three phases: independent phase (two blocks), evaluation phase (one block), and the collaboration phase (three blocks). Each block lasted for 30s, and was separated by a fixation period jittering around 7-8s. Ref[1]: Xie, Hua, et al. "Finding the neural correlates of collaboration using a three-person fMRI hyperscanning paradigm." bioRxiv (2019): 782870.

tda-msc-rsfMRI

Code for analyzing MSC rsfMRI data using TDA

braindynamicslab.github.io

Lab's website

cme-creativity

code and data for continuous multitask experiment to anchor creativity into known cognitive constructs

tda-metpro

tda-mito-networks