borenstein-lab / fishtaco

FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of microbiome functional shifts

borenstein-lab/fishtaco Issues

Test File Errors
Updated 2 years ago2
error for enet_path in test_fishtaco.py
Closed 3 years ago2
Error when visualizing output with fishtaco plot
Updated 3 years ago6
Error when trying to change number of folds for cross validation
Closed 3 years ago2
typo in delimiter for read_csv
Updated 3 years ago1
Using FishTaco based on non-MetaPhlan2 taxonomic info
Updated 4 years ago6
Error message: run FishTaco with PICRUSt-derived metagenomic functional profile
Closed 4 years ago9
Error: Computing a differential abundance score for each taxa
Closed 4 years ago5
How can I run FishTaco with QIIME2 and PICRUSt2 output files?
Updated 4 years ago1
Error with cross_validation
Closed 5 years ago2
Data normalization
Updated 5 years ago3
Install issue on MacOS
Updated 6 years ago3
License for version 1.1.0 and onwards
Updated 7 years ago
How many rows should I choose about function (e.g., KO) records in Function abundance file
Updated 7 years ago3