A simple viewer for Sanger trace file made with Qt5. Supports AB1 and SCF 3.0 file formats.
Linux binary is available as AppImage. Download the AppImage from here. Run it as follow:
chmod +x cutepeaks-0.2.0-linux-x86_64.appimage
./cutepeaks-0.2.0-linux-x86_64.appimage
From website: Download Qt ≥ 5.7 from https://www.qt.io/. Don't forget to check QtChart module during installation.
From Ubuntu: Qt 5.7 is not yet available with Ubuntu. But you can add a PPA to your software system. For exemple for Xenial:
sudo add-apt-repository ppa:beineri/opt-qt57-xenial
sudo apt install qt57base qt57charts-no-lgpl
source /opt/qt57/bin/qt57-env.sh
From Fedora: Qt 5.7 is available.
sudo dnf install qt5-qtbase-devel qt5-qtcharts-devel
Be sure you have the correct version of Qt (≥ 5.7) by using qmake --version. For exemple, if you have installed Qt from ppa:beineri, you will find it under /opt/qt57/bin/qmake. Then launch the compilation from CutePeaks folder as follow.
/opt/qt57/bin/qmake --version
/opt/qt57/bin/qmake
make
sudo make install
CutePeaks supports following trace file formats:
- *.ab1
- *.scf
Labsquare Team (2017). CutePeaks: a simple Sanger trace file. Available online at https://github.com/labsquare/CutePeaks doi:10.5281/zenodo.824555