bmpvieira / nf-cloud-gpu-test

Simple test Nextflow pipeline for testing GPU capabilities with cloud systems such as AWS Batch

nf-cloud-gpu-test

Simple Nextflow pipeline for testing GPU capabilities with cloud systems such as AWS Batch

Nextflow installation

curl -s https://get.nextflow.io | bash
export NXF_VER=21.04.3
nextflow self-update

Execution test

With GPU

nextflow run main.nf -bg -profile awsbatch --GPU ON &> log.gpu

Without GPU

nextflow run main.nf -bg -profile awsbatch --GPU OFF &> log

TODO

• Add Terraform scripts here