Brian Mannakee's repositories
bmannakee.github.io
personal site
broom
Convert statistical analysis objects from R into tidy format
caller_paper
Repository for writing up empirical variant caller
diln
This implements the discrete infinite logistic normal, a Bayesian nonparametric topic model that finds correlated topics.
dissertation_proposal
Proposal repository
mstumorsim
Simulate a tumor with realistic clonality and mutation spectrum
fsdl-text-recognizer-project
Full Stack Deep Learning Bootcamp Project (Public)
git_demo_iplant
Repository for gapminder processing at IPlant
NAB
The Numenta Anomaly Benchmark
sig_tracker
Tracks Signature evolution
Stat571A
Code for project in Stat 571A
Stat571B
Files for stat 571B
tumor_experiment
A package to set up simulation experiments with simulation using the VarSim package from Roche
UA_beamer_slides
University of Arizona themed beamer slides for presentations
vcNumerics
Numerical analysis of the precision-recall surface for depth, prior, and threshold distributions.