Bipin Rimal's repositories
AI-Coding
AI algorithms
bioinfo-tools
Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.
bipinrimal
Config files for my GitHub profile.
bipinrimal.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
cbios_practicum
CBIOS-practicum Project
dailyjournal
A simple bash script which when opens up text editor to keep daily journal.
genbank-diffexp-merge-GO
Genbank and Differential Expression Data Merge to get GO_annotations for non-model organism usually bacteria from GO-annotated genome from NCBI
just-annotate
Functional analysis of genomic data
scripts
Bioinformatics Scripts
crc_meta
Code and analysis results for the CRC shotgun meta-analysis
DAT158ML
Material for the course DAT158 at HVL
liverCom
microbiome-liver model
llm-course
Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.
mml-book.github.io
Companion webpage to the book "Mathematics For Machine Learning"
Tools-Microbiome-Analysis
A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
tutorials
:books: Various bioinformatics tutorials
Wallen_DAMethodCompare_2021
Source code used in the manuscript "Comparison study of differential abundance testing methods using two large Parkinson disease gut microbiome datasets derived from 16S amplicon sequencing"
web-extraction
Script to tabulate universities, programs and other info in the US - (may not work now)