Biomedical Network Science Lab

Biomedical Network Science Lab's repositories

ctcl_case_study

Language:Python000

xml_melc_melanoma

Master's thesis Anna Möller

Language:Jupyter NotebookMIT100

SHouT

Spatial heterogeneity quantification tool

Language:Jupyter NotebookGPL-3.0000

enquire_web

Web tool extension for the ENQUIRE gene-mesh term PubMed mining application

Language:HTMLGPL-3.0000

KINference-Evaluation-Scripts

Language:R000

KINference

Language:RMIT000

PARADYS

Language:PythonGPL-3.0000

grn-benchmark

Auxiliary information for grn-benchmark.

Language:HTMLGPL-3.0000

grn-benchmark-meta

Language:HTML000

PARADYS_Validation

Language:Python000

grn-nextflow

Boostdiff workflow

Language:RMIT100

robust_bias_aware_pip_package

A python package for ROBUST disease module mining algorithm with study bias correction via the incorporation of bias-aware edge costs.

Language:PythonGPL-3.0000

robust-web

Language:HTMLGPL-3.0100

robust_bias_aware

Study-bias-aware, robust disease module mining

Language:PythonGPL-3.0000

python-intro

Introduction to Python

Language:Jupyter NotebookCC-BY-4.0700

ALS_MELC_Data_Analysis

Language:Jupyter NotebookMIT100

robust

ROBUST: Robust disease module mining via enumeration of price-collecting Steiner trees

Language:Jupyter NotebookGPL-3.0500

sgGSEA

Network-based single-gene gene set enrichment analysis

Language:Jupyter NotebookGPL-3.0100

TCL-project

Language:Python000

digest-api

Language:PythonGPL-3.0000

digest-web

Language:VueGPL-3.0000

ENQUIRE-MACOS

Language:HTMLCC0-1.0000

robust-package

Language:Python000

ENQUIRE-WEB

Language:HTML000

COVID19-surya

Language:Jupyter Notebook000

grn-confounders

Assessing effect of sex, age, and ethnicity confounders on GRN and co-expression network inference

Language:Jupyter NotebookGPL-3.0100

melc_imaging_spatial_proteomics

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digest

Language:PythonGPL-3.0000

digest-py

Python package for DIGEST

Language:PythonGPL-3.0100

ppi-network-simulation

Simulates emergence of observed PPI networks under study bias

Language:Jupyter NotebookGPL-3.0000