bioinfoacademy / coessentiality-browser

Gene browser using coessentiality and related data

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coessentiality-browser

Gene browser using coessentiality and related data. From the paper:

A genome-wide almanac of co-essential modules assigns function to uncharacterized genes. (https://www.biorxiv.org/content/10.1101/827071v1)

Installation/dependencies

sudo apt-get install libblas-dev liblapack-dev gfortran

In a conda environment, run: pip install -r requirements.txt.

The main requirement is Dash (https://github.com/plotly/dash/), a framework for building the interactive interface.

Launching interactive browser

From the conda environment, run python app.py

The default IP is 0.0.0.0:5000 .

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Gene browser using coessentiality and related data


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