bioinfo-chru-strasbourg

bioinfo-chru-strasbourg's repositories

python plotly Circos from VCF

Language:PythonAGPL-3.026 2 20

STARK is a Next-Generation Sequencing data analysis pipeline for clinical diagnosis

Language:PythonAGPL-3.05 1 17

STARK Modules & Services

Language:JavaScript5 20

Highly Open Workflow for Annotation & Ranking toward genomic variant Discovery

Language:PythonAGPL-3.03 2 85

Language:VueAGPL-3.0200

ANNOVAR

AGPL-3.0100

Language:DockerfileApache-2.0000

BCFTOOLS

AGPL-3.0000

CAP (Clipping Amplicon Primer) clips amplicon primers by identifying the most probable amplicon for each reads

Language:Perl010

EDITH dashboard monitoring STARK analyses

AGPL-3.0000

FATBAM

AGPL-3.0000

HGVS variant name parsing and generation

Language:PythonMIT000

OutLyzer

AGPL-3.0000

loki is a validation tool for stark infrastructure

Language:PythonGPL-3.0010

A simple and powerful tool designed for variant ranking from next generation sequencing data

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VISION - VCF Viewer and Prioritization [JARVIS module]

Language:JavaScriptAGPL-3.0000