bioermaf's repositories
Absolut
Unconstrained lattice antibody-antigen bindings generator
bio-transformers
bio-transformers is a wrapper on top of the ESM/Protbert model, trained on millions on proteins and used to predict embeddings.
bio_embeddings
Get protein embeddings from protein sequences
ChatGPT
Use ChatGPT API without authentication in +130 languages!
ColabDesign
Making Protein Design accessible to all via Google Colab!
D-SCRIPT
A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
diffab
✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
DiffDock-PP
Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)
drug_data_for_ml
Therapeutics Data Commons: Artificial Intelligence Foundation for Therapeutic Science
DSResSol
DSResSol: A sequence-based solubility predictor created with Dilated Squeeze Excitation Residual Networks
equidock_public
EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
equifold
Official code repository for EquiFold
efficient-evolution
Efficient evolution from protein language models
esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
gvp-pytorch
Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure
IgFold
Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
ImmuneBuilder
Predict the structure of immune receptor proteins
lama-cleaner
Image inpainting tool powered by SOTA AI Model
live
✯ 一个国内可直连的直播源分享项目 ✯ 🔕 永久免费 直连访问 完整开源 不含广告 完善的台标 直播源支持IPv4/IPv6双栈访问 🔕
localcolabfold
ColabFold on your local PC
PaddleHelix
Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集
project-based-learning
Curated list of project-based tutorials
ProtTrans
ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
PymolFold
Protein folding in Pymol
termux-alpine
Bash script for installing Alpine Linux in Termux - 100 MB.
win-hmmer
hmmer for windows