bioFAM / MOFA

Multi-Omics Factor Analysis

bioFAM/MOFA Issues

No gene is appearing in plot_enrichment_detailed
Updated a month ago
Vignette html flies not accessible
Updated 3 months ago
Archive this repo
Updated 4 months ago
AttributeError: module 'mofapy' has no attribute 'core.entry_point'
Closed 4 years ago4
'MOFAtools'
Updated 3 years ago
predict function should use S3 dispatching
Updated 3 years ago
Error in py_call_impl(callable, dots$args, dots$keywords) : UnicodeEncodeError: 'ascii' codec can't encode character '\u03b5' in position 5: ordinal not in range(128)
Updated 3 years ago
Problem to use plotVarianceExplained object in ggplot2
Updated 4 years ago
Problem to use mofaOBJECT
Updated 4 years ago2
Different data processing on metabolomics, I get different R2.
Updated 4 years ago7
Thanks. another problem on running MOFA
Closed 4 years ago
AssertionError: dimensionality mismatch
Updated 4 years ago1
error message: mofapy package not found.
Closed 4 years ago2
Failure to Capture Common Sources of Variance in Data
Updated 4 years ago1
Error in py_call_impl(callable, dots$args, dots$keywords) : AttributeError: 'NoneType' object has no attribute 'getExpectations'
Updated 4 years ago1
MOFA2: IndexError: list index out of range
Closed 4 years ago1
plotDataHeatmap() error with correlation but not with euclidean distance
Closed 4 years ago2
Documentation missmatch for getDefaultModelOptions()$numFactors
Closed 4 years ago1
Error in if (any(r[[i]] > cor_threshold)) { : missing value where TRUE/FALSE needed
Closed 4 years ago3
Question on initialization
Closed 4 years ago2
Issue with runMOFA(object)
Closed 4 years ago1
plotDataHeatmap() plots interpretation
Closed 5 years ago5
Improving memory efficiency for CITE-seq data analysis
Closed 5 years ago5
Error in py_get_attr_impl(x, name, silent) : AttributeError: module 'mofapy' has no attribute 'core.entry_point'
Closed 5 years ago7
errors in installing MOFA
Closed 5 years ago2
ERROR in
Closed 5 years ago
How can I extract the gene sets with larger weights in the factors?
Closed 5 years ago2
Likelihood for methylation data
Closed 5 years ago7
Range of total variance explained per view
Closed 5 years ago4
function "plotTilesData" not included in MOFA package from BiocManager
Closed 5 years ago2
Enrichment analysis with HUGO symbols
Closed 5 years ago2
Error when creating object from MAE
Closed 5 years ago3
Failure to install with custom python
Closed 5 years ago2
Endless Removal of Factors
Closed 5 years ago6
Error in py_call_impl(callable, dots$args, dots$keywords) : SystemExit: None
Closed 5 years ago2
plotEnrichmentHeatmap doesn't pass arguments to pheatmap
Closed 5 years ago1
Do added Markov Blankets get passed over?
Closed 5 years ago3
Error in py_call_impl(callable, dots$args, dots$keywords): TypeError: Cannot cast ufunc add output from dtype('complex128') to dtype('float64') with casting rule 'same_kind'
Closed 5 years ago5
Missing for loop
Closed 5 years ago2
Truncated feature names after runMOFA
Closed 5 years ago2
Feature request: FSEA direction of pathway/factor association
Closed 5 years ago2
ValueError in getLvIndex
Closed 5 years ago2
Trouble Installing MOFA in R
Closed 6 years ago4
License?
Closed 6 years ago2
Error in py_call_impl(callable, dots$args, dots$keywords) : SystemExit: None
Closed 6 years ago5
Error in py_call_impl(callable, dots$args, dots$keywords)
Closed 6 years ago6
Error in runMOFA function
Closed 6 years ago6
BLAS libraries use maximum number of available cores.
Closed 6 years ago2
Training and validation set
Closed 6 years ago1
createMOFAobject() function - error with view names
Closed 6 years ago5