bids-standard / bids-validator

Validator for the Brain Imaging Data Structure

https://bids-standard.github.io/bids-validator/

bids-standard/bids-validator Issues

deno validator: --filenameMode still wants dataset path and then seems to do more than just paths validation
Updated a month ago1
deno: chokes on `derivatives/bagel.csv`
Updated a month ago
deno: Does not ERROR on the unknown DatasetType + does not warn that no subjects
Updated a month ago
deno validator: complains about EVENT_ONSET_ORDER but AFAIK they are sorted!
Updated a month ago
deno validator: incorrectly claims that README is missing
Closed 2 months ago4
Make bids-validator conform to BIDS-App (or execution-spec right away) specification
Updated 2 months ago2
Introspect values in failing checks
Updated 2 months ago3
deno validator: add option to run only specified list of checks
Updated 2 months ago
git query for version -- redirect stderr to /dev/null or provide -c safe.directory=*
Closed 2 months ago
do not add ANSI coloring if stdout is not a tty -- add `--color=auto,yes,no`
Updated 2 months ago1
EEG: multiple dataset files can be submitted with different extension
Updated 2 months ago7
Provide means (result records schema) for external validators (e.g. NWB)
Updated 2 months ago
"phenotype.tsv" referenced in part of validator, but this is not a BIDS file
Updated 2 months ago1
Deno validator import path error
Closed 2 months ago3
Deno validator doesn't detect absent required files
Closed 2 months ago1
Error 1: [Code 0] INTERNAL ERROR
Updated 2 months ago1
sessions.json
Updated 2 months ago
Wrong error message on validation of stim file
Closed 2 months ago1
Warning for samples.tsv column names already defined in the standard.
Updated 2 months ago1
version reporting in compiled/installed version from url is just "master" or "alpha"
Updated 2 months ago1
Bundle schema validator and legacy validator into Docker container
Updated 2 months ago
Legacy validator permitting (i)EEG files without sidecars
Updated 2 months ago3
New phenotype filename rule messes with filename rule suggestion heuristic.
Updated 2 months ago
deno: lost --config option?
Updated 2 months ago3
TSV column type check overhaul
Closed 2 months ago6
Error 1: [Code 1] NOT_INCLUDED in valid (?) filenames across dataset and more errors
Closed 2 months ago1
No error/warning when IDs in `participant.tsv` do not match directory names
Updated 2 months ago5
Implement allequal in expression language.
Closed 2 months ago2
[BUG] Validator isn't screaming when PET image files are lacking sidecar files
Closed 3 months ago1
IntendedFor links pointing at `_meg.ds/` directories fail
Closed 3 months ago
deno testing 101: deno_tests.yml is chronically red, "on purpose"?
Updated 3 months ago4
CITATION.cff support
Updated 3 months ago
deno run on a built bids-validator.js: Attempted to load JSON module without specifying "type"
Updated 3 months ago2
Tests for some reason expect `/tmp/$USER` to exist?
Updated 3 months ago1
IntendedFor links pointing into `derivatives/` directory fail
Closed 3 months ago2
Should we be relaxed about initial `/` for dataset-relative paths?
Updated 3 months ago
Update evalInitialColumns to account for recommended columns.
Updated 3 months ago
deno: could --schema be made to take `src/schema` yaml tree as input?
Closed 3 months ago5
Deno validator: set exit code based on validation success/failure
Closed 3 months ago2
deno 101: how to ship/run the "build"?
Closed 3 months ago7
Deno validator returns issues without paths for files
Closed 3 months ago1
Validator requires echo entity to be immediately before "_bold.nii.gz"
Closed 3 months ago4
Make -s|--schema take path or add new --schema-file option to point to schema.json file
Closed 3 months ago8
Using the optio --schema master (-s master) is throwing an error
Closed 3 months ago1
github action to run bids-validator on bids-examples
Updated 3 months ago
PET recon parameter error - need to implement a conditional statement
Closed 5 months ago6
Checking participants against folder names
Updated 5 months ago3
HED column in tsv file should not give a warning
Closed 5 months ago3
motion.tsv files raise warnings and can raise errors due to a lack of column headers
Closed 6 months ago
PEPOLAR fieldmaps throwing code 90 (SIDECAR_WITHOUT_DATAFILE) when `part-<value>` is present
Closed 6 months ago4