biadias

Rpath

R implementation of the mass balance model Ecopath with Ecosim

gts

Gridded time series analysis

EconAnalysis

Economic analysis of the project (e.g. landings model and discrete choice model)

ROMS_to_Index

Functions to develop environmental indices from Regional Ocean Modelling System models

fish-FAR

Recruitment responses to anthropogenic ocean warming

litsearchr

litsearchr is an R package to partially automate search term selection for systematic reviews using keyword co-occurrence networks. In addition to identifying search terms, it can write Boolean searches and translate them into over 50 languages.

ecopath_matlab-pkg

Matlab implementation of the Ecopath food web mass-balance algorithm

stan_cheatsheets

A collection of RStudio style cheatsheets for the Stan ecosystem

bayesdfa

Bayesian DFA with Stan

safs-timeseries

Repository for miscellaneous code and data used in FISH 550 (Applied Time Series Analysis) at University of Washington

rstan

RStan, the R interface to Stan

nimble-virtual-2021

Materials for the virtual NIMBLE workshop, May 26-28, 2021. For logistical information, please look below the file listing.

FishR101

This acts as the landings site for the Jan-Feb 2021 R Workshop for RACE GAP organized by Caitlin Allen Akselrud (@CaitlinAkselrud-NOAA), Emily Markowitz (@EmilyMarkowitz-NOAA), and others. https://emilymarkowitz-noaa.github.io/FishR101/index.html

lectures

Lecture notes for EC 607

curso

Curso de formação em ciência aberta, git & Rmarkdown

adcomp

AD computation with Template Model Builder (TMB)

reprex

Render bits of R code for sharing, e.g., on GitHub or StackOverflow.

intro-gam-webinar-2020

labhub

Fay Labhub site. (Forked from apreshill/labhub - OHSU Open Science Workshop on tools and methods for building transparency within a lab)