Bhim Chaulagain's repositories
analysis_of_microbiome_community_data_in_r
This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://grunwaldlab.github.io/analysis_of_microbiome_community_data_in_r/
APS_IntroR_2019
Introduction to R
bhimchaulagain.github.io
My blog
Bioinformatics-Genome-Assembly-and-Analysis-Workshop-Pac-Bio-and-10x-Genomics-
Bioinformatics: Genome Assembly and Analysis Workshop [ Pac Bio and 10x Genomics ] - Dec 2016
Bioinformatics-Training
Bioinformatics training resources
BroodParasiteDescription
Code and data associated with Duffy, James, and Longworth Applied and Environmental Microbiology paper describing the ecology, virulence, and phylogeny of a brood parasite of Daphnia, Blastulidium paedophthorum; http://dx.doi.org/10.5281/zenodo.17804
InformationTheory
Epidemiology PLP6905
library_management_system
capstone project_Day1
NetworksPlantPathology
ICPP 2018 Workshop: Network Analysis in Plant Pathology
OPP_Workshop_Multivariate
Supporting data and information for the Workshop "Introduction to Multivariate Statistics Using R" presented at the International Congress of Plant Pathology 2018 Boston USA
paper-white-mold-meta-analysis
Data and R codes for reproducing the meta-analysis of the relationships between soybean white mold incidence (inc) and soybean yield (yld) and inc and sclerotia weight (scl) from a paper: doi:10.1111/ppa.12590
personal-website
Code that'll help you kickstart a personal website that showcases your work as a software developer.
Population_Genetics_in_R
A primer for computational tools to analyze genetics of populations in R
project-based-learning
Curated list of project-based tutorials
Python_Interview_Questions
This repository contains most of the important questions in an interview for a Python role
R-ecology-lesson
:notebook: Data Carpentry R lessons on ecology.
r-raster-vector-geospatial
Data Carpentry: Introduction to Geospatial Raster and Vector Data with R
RC-example-webpage
Example of a Research Compendium as a webpage
Reproducibility_in_Plant_Pathology
A systematic/quantitative review of articles, which will provide a basis for identifying what has been done so far in the field of plant pathology research.
Reproducible-science-in-R
This site provides information on conducting reproducible science using the R language.
research-compendium-website
A template for creating a research compendium for a website interface
rmarkdown-website-tutorial
Tutorial for creating websites w/ R Markdown
RNA-Seq-Workshop-Library-Preparation-and-Introduction-to-Data-Analysis
RNA-Seq Workshop: Library Preparation and Introduction to Data Analysis